Meme Mast

The sequence databases showing the sequence and residue counts.

Meme mast. Search a sequence database for occurences of known motifs. Other meme mast utilities may be found in the directory soft allpathslg ver bin. It can be used to look for sequences that contain motifs found by meme by other motif discovery tools or that are taken from a motif database. Insanely fast mobile friendly meme generator.

The name of a file containing meme formatted motifs outputs from meme and dreme are supported as well as minimal meme format. The motifs showing the name width best scoring match and similarity to other motifs. Glam2scan scanning with gapped motifs. A query file containing meme formatted motifs outputs from meme and dreme are supported as well as minimal meme format.

Mast previously required a log odds matrix in the motif format but while the log odds section is used preferentially it is no longer required. The inputs to mast including. The meme suite allows the biologist to discover novel motifs in collections of unaligned nucleotide or protein sequences and to perform a wide variety of other motif based analyses. Gomo gene ontology for motifs.

Mast is a web based tool that can be used to search for sequences that match one or more motifs. Caption a meme or image make a gif make a chart make a demotivational flip through images. Module load meme meme dataset options for documentation refer to the meme mast homepage or use the h option e g meme h. Mast waiting meme generator the fastest meme generator on the planet.

Spamo spaced motif analysis tool. Mast previously required a log odds matrix in the motif format but while the log odds section is used preferentially it is no longer required. Meme chip motif analysis of large nucleotide datasets. Where ver is the version of meme mast you are using.

Mcast motif cluster alignment and search tool. Easily add text to images or memes. Mast can ignore motifs in the query with e values above a threshold you select this is desirable because motifs with high e values are unlikely to be biologically significant if this option is disabled then mast will use all the motifs in the query regardless of their e values. Lorem ipsum dolor sit amet consectetur.

Make mast waiting memes or upload your own images to make custom memes. Let s lorem suit up. Glam2 gapped local alignment of motifs. The search results showing top scoring sequences with tiling of all of the motifs matches shown for each of the sequences.

Search results the mast results consist of. The meme suite supports motif based analysis of dna rna and protein sequences. Mast motif alignment search tool.